Course: Biotransformations in the Laboratory and in the Industry

« Back
Course title Biotransformations in the Laboratory and in the Industry
Course code OCH/BIOT
Organizational form of instruction Lecture
Level of course Master
Year of study 1
Semester Summer
Number of ECTS credits 3
Language of instruction Czech
Status of course Compulsory-optional
Form of instruction Face-to-face
Work placements This is not an internship
Recommended optional programme components None
Lecturer(s)
  • Biedermann David, RNDr. Ph.D.
  • Soural Miroslav, doc. RNDr. Ph.D.
Course content
Lecture 1 History of biotransformation, basic concepts, enzymes, biocatalysts, mechanistic aspects, biocatalysis and industry. Enzyme production. Lecture 2 When and why to choose enzymatic transformation? Advantages and disadvantages of biotransformations, stereochemistry, CIP rules, catalysis and symmetry (repetition). Lecture 3 Enzyme kinetics (repetition). Kinetic resolution as a concept. Kinetic resolution and biocatalysis. Desymmetrization, deracemization, meso-compounds. Lecture 4 Hydrolytic reactions. Amide hydrolysis, proteases. Industrial processes of the enantiopure aminoacids synthesis. Lecture 5 Ester hydrolysis. Esterases, proteases, lipases. Special cases of kinetic resolution. Dynamic kinetic resolution. Lecture 6 Hydrolysis of phosphates, epoxides, nitriles. Lecture 7 Redox reactions. Cofactor recyclation. Aldehyde and ketone reduction, double bond reduction. Lecture 8 Oxidation of aldehydes and ketones, oxygenations. Lecture 9 Oxygenations (continued), peroxidations. Lecture 10 C-C bond creation, aldol reaction, acyloin reaction, Michael addition. Tyrosinases. Lecture 11 Addition and elimination reactions, glycosylations. Halogenations and dehalogenations. Lecture 12 Special techniques, enzymes and organic solvents, immobilization, modification.

Learning activities and teaching methods
Lecture
Learning outcomes
The lecture should give students basic insight into the utilization of the enzymatic reactions in organic chemistry and in the industrial processes. Students should be able to recognize synthetic steps suitable for enzymatic reaction and should individually be able to suggest steps of simple enzymatic synthesis mainly for the kinetic resolution of enantiomers.
Ability to design enzymatic synthesis and propose specific enzyme and technique to achieve required target molecule.
Prerequisites
unspecified

Assessment methods and criteria
Oral exam, Written exam

Knowledge of basic organic chemistry and biochemistry is required. Students should know CIP rules and stereochemistry. Credits are given for test with 60% of the right answers. Examination is oral.
Recommended literature
  • Bornscheuer U. T., Kazlauskas R. J. (2006). Hydrolases in Organic Synthesis: Regio? and Stereoselective Biotransformations. Wiley.
  • Drauz K., Gröger H., May O. (2012). Enzyme Catalysis in Organic Synthesis. Wiley.
  • Faber K. (1997). Biotransformations in Organic Chemistry, a Textbook. Springer.
  • Liese A., Seelbach K., Wandrey C. (2006). Industrial Biotransformations. Wiley.


Study plans that include the course
Faculty Study plan (Version) Category of Branch/Specialization Recommended year of study Recommended semester
Faculty: Faculty of Science Study plan (Version): Bioorganic Chemistry and Chemical Biology (2020) Category: Chemistry courses 1 Recommended year of study:1, Recommended semester: Summer
Faculty: Faculty of Science Study plan (Version): Organic Chemistry (2021) Category: Chemistry courses 1 Recommended year of study:1, Recommended semester: Summer