Předmět: Recombinant GFP technologies and their applications

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Název předmětu Recombinant GFP technologies and their applications
Kód předmětu KBI/GFPTE
Organizační forma výuky Přednáška + Seminář
Úroveň předmětu Magisterský
Rok studia nespecifikován
Semestr Letní
Počet ECTS kreditů 4
Vyučovací jazyk Angličtina
Statut předmětu Volitelný
Způsob výuky Kontaktní
Studijní praxe Nejedná se o pracovní stáž
Doporučené volitelné součásti programu Není
Vyučující
  • Luptovčiak Ivan, Mgr. Ph.D.
Obsah předmětu
1. History. Discovery of fluorescent proteins, their natural sources and biological functions. Principles of bioluminescence. 2. Physical, chemical and molecular properties of fluorescent proteins. Three-dimensional structure and variations in structure as the basis of functional variability. 3. Green fluorescent protein from Aequorea victoria (GFP) and its mutated allelic forms. Changes in spectral properties, photostability and phototoxicity. Types and properties of naturally occurring fluorescent proteins from other species. 4. Spectral properties of fluorescent proteins and their use in cell biology. Maturation of fluorochromes and expression of excitation and emission properties. The problem of dimerization and oligomerization, targeted development of monomeric forms. 5. Molecular biology of recombinant GFP technologies. Cloning, vectors, construction of plasmids for gene transfer. Creation of fusion products of fluorescent proteins. Methods of propagation, isolation and transformation. Sequences of chimeric genes. 6. Passive applications of GFP technologies. Functional fusion of GFP and recombinant expression. Cell markers, reference genes, fusion proteins. 7. Spectrum of use of GFP technologies in various species of organisms. Applications in functional cell studies. 8. Specific tagging of fluorescent proteins for dynamic study of cell organelles. Monitoring the dynamics of organelles and GFP-fusion proteins, subcellular localization, multicolor imaging and colocalization. 9. Use of fluorescent protein technology in plants: preparation of constructs, transformation, expression, detection. Variants of fluorescent proteins for multispectral detection in living cells. Expression of non-toxic markers by non-invasive method in real time. 10. Practical applications of real-time study of living cells: Quantitative analysis of proteins, their interactions and dynamic redistribution in cells by FRET, FLIM, FRAP, FLIP methods. Visualization of molecular interactions in living cells by bimolecular fluorescence complementation. Principle, possibilities of use and application. Fluorescence correlation spectroscopy. 11. Optical variants of fluorescent proteins and their applications. Photoactivation, photoconversion, photoinduction, time-spectral activation. 12. Genetically encoded fluorescent molecular biosensors: Active application of GFP technologies for sensitive detection of physiological and metabolic cellular changes.

Studijní aktivity a metody výuky
nespecifikováno
Výstupy z učení

Theoretical knowledge of the principle of modern recombinant GFP technologies, their use and practical applications in plant biology.
Předpoklady
nespecifikováno

Hodnoticí metody a kritéria
nespecifikováno
Active participation and preparation of a seminar paper (accounts for 30% of the final assessment) and successful completion of a written exam in the form of a test (70% of the final assessment) with a minimum score of 75% for successful completion of the course
Doporučená literatura
  • Berg RH, Beachy RN. (2008). Fluorescent protein applications in plants. Methods Cell Biol 85.
  • Chudakov DM, Matz MV, Lukyanov S, Lukyanov KA. (2010). Fluorescent proteins and their applications in imaging living cells and tissues. Physiol Rev 90.
  • Sullivan KF. (2008). Fluorescent Proteins. Methods in Cell Biology - Svazek 85.
  • Tsien RY. (1998). The green fluorescent protein. Annu Rev Biochem 67.


Studijní plány, ve kterých se předmět nachází
Fakulta Studijní plán (Verze) Kategorie studijního oboru/specializace Doporučený ročník Doporučený semestr
Fakulta: Přírodovědecká fakulta Studijní plán (Verze): Biotechnologie a genové inženýrství (2019) Kategorie: Chemické obory - Doporučený ročník:-, Doporučený semestr: Letní