- Systematics, its role in biology - Phenetics, distance metrix, evolutionary systematics, cladistics - Homology, homoplasy, polarization of characters, outgroup principle, - Data, types, morphology, molecules, behaviour, sources of data - Data matrices, coding of characters - Alignment, dynamic and static methods, structural alignment - Methods in phylogenetics, parsimony, maximum likelihood, bayesian analysis - Phylogenetic trees, measures of support, consensus trees, interpretation of phylogenetic hypothesis - Dating, clocks, calibration, rate of molecular evolution - Phylogenetic methods in biogeography, reconstruction of ancestral areas, evolution of characters - Phylogenetic trees bellow species level, statistical parsimony, networks - Phylogenetic systematics, ICZN, Phylocode
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