Course: Seminar in Plant Proteomics

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Course title Seminar in Plant Proteomics
Course code KBI/RP
Organizational form of instruction Seminar
Level of course Master
Year of study not specified
Semester Summer
Number of ECTS credits 2
Language of instruction Czech
Status of course Compulsory
Form of instruction Face-to-face
Work placements This is not an internship
Recommended optional programme components None
Lecturer(s)
  • Takáč Tomáš, doc. Ing. Ph.D.
Course content
Students will, based on assignments provided by the instructor, evaluate proteomic data from scientific publications. According to a given specification, they will complete a tasks focused on the bioinformatic analysis of proteomic data (for example protein function, localization, interactions, structure prediction, signaling pathway prediction, etc.) using software applications. The results of their analyses will be presented in the form of a PowerPoint presentation, followed by a discussion of the presented results. Students will also prepare a proposal on how to apply proteomic analysis in addressing the topic of their master's thesis.

Learning activities and teaching methods
Lecture, Work with Text (with Book, Textbook)
  • Homework for Teaching - 60 hours per semester
Learning outcomes
Students will gain knowledge about the proteomic techniques and their exploitation in plant science. Students will get familiar with proteomic scientific literature as well as basics of proteomic data evaluation.
Students will gain skills in presenting of proteomic experimental papers, in handling, evaluation and interpretation of proteomic data.
Prerequisites
unspecified

Assessment methods and criteria
unspecified
Regular attendance on the seminars. Elaboration and presentation of bioinformatic evaluation of proteomic data. Presentation of potential application of proteomic methods in diploma thesis.
Recommended literature
  • Albert, I. The Biostar Handbook (2nd ed.). 2025.
  • Šamaj J, Thelen J. Plant Proteomics. Berlin.


Study plans that include the course
Faculty Study plan (Version) Category of Branch/Specialization Recommended year of study Recommended semester
Faculty: Faculty of Science Study plan (Version): Biotechnology and Genetic Engineering (2019) Category: Chemistry courses 1 Recommended year of study:1, Recommended semester: Summer